Tezler
Biyomühendislik - Yüksek Lisans
- Structure Activity Relationship for Antifungal Activity of Chalcone Derivatives (2024)
Biyomühendislik - Doktora
Biyoinformatik ve Sistem Biyolojisi - Yüksek Lisans
- Constraint-based Analysis of the Genome-scale Metabolic Networks for Klebsiella pneumoniae to Identify New Putative Drug Targets (2018)
- Bioinformatic analysis of temperature-based activation of adipocytes (2018)
- Reconstruction of a brain-specific genome-scale metabolic network model for Mus musculus for the investigation of neurodegenerative diseases (2019)
- Network-based analysis of cognitive impairment and memory deficits from transcriptome data (2019)
- Integrative analysis of bladder cancer transcriptome data and genome-scale metabolic networks to understand dormancy mechanism (2019)
- Integrative analysis of transcriptome data and genome-scale metabolic networks to identify candidate drug targets and drugs for Parkinson's disease (2019)
- Systems biological analysis of protein-protein interactions and the related drug-protein interactions to identify potential drugs for repurposing against infectious diseases (2019)
- Systems biological analysis of protein-protein interactions and the related drug-protein interactions to identify potential drugs for repurposing against infectious diseases (2020)
- Identification and investigation of cell types and cell-to-cell communication in non-small cell lung cancer (2020)
- Integrative analysis of transcriptome data and cellular networks to reveal molecular interactions of metastasis mechanisms in cancer (2020)
- Genome-scale metabolic network reconstruction and constraint-based analysis of selected disease-associated bacteria: Klebsiella pneumoniae HS11286 and Prevotella copri DSM 18205 (2020)
- Mathematical modelling of molecular trajectories in stem cell transformation processes via bioinformatic analysis of single cell omics data (2021)
- Quantitative kinetic modelling of signaling pathways regulating pluripotency (2021)
- Temporospatial metabolic modelling of Pseudomonas aeruginosa and Staphylococcus aureus on a chronic wound (2021)
- Reconstruction and transcriptome based analysis of rat brain-specific genome-scale metabolic network model for parkinson's disease (2021)
- Identification of novel drug targets for Parkinson's disease by protein-protein interaction based drug repositioning approaches (2021)
- Integrative analysis of multi-cellular genome-scale metabolic networks with cell type specific transcriptome data predicted by deconvolution algorithms: Application to Parkinson's disease (2021)
- Investigation of microbial biomarkers for colorectal cancer diagnosis through 16S rRNA metagenomic data (2022)
- Identification of TF-mediated dynamics of signalling pathways in stem cell reprogramming and differentiation using NGS data (2022)
- Computational characterization of ligand specificity and promiscuity of Staphylococcus aureus nora efflux pump (2023)
- Spatial modeling of tumor microenvironment (2023)
- Accurate free energy calculations for binding of small molecules to SARS-CoV-2 main proteases, HIV-1 proteases and JNK1 protein kineases with molecular dynamics simulations using molecular mechanics, quantum mechanics and machine learning (2023)
- A personalized approach on molecular mechanisms of Alzheimer's disease: Mapping transcriptome on protein interactome (2023)
- A benchmark study for RNA-seq based splicing analysis tools: Detection of aberrant splicing events for rare diseases (2023)
- Cell subtype specific roles of glial cells in Alzheimer's disease by network-based analysis of single-cell multi-omic data (2024)
Biyoinformatik ve Sistem Biyolojisi - Doktora
- Spatial cellular communication in pancreatic cancer microenvironments (2023)
