Biyomühendislik

Yrd. Doç. Dr. Saliha DURMUŞ
Biyomühendislik

Saliha DURMUŞ
Telefon
(262) 605 3322
E-Posta
salihadurmus(at)gtu.edu.tr
Ofis
, 148
Çalışma alanları
Patojen-Konak Etkileşim Sistemleri, Enfeksiyon Mekanizmaları, Sinyal İleti Ağyapıları, Hesaplamalı Sistem Biyolojisi, Biyoinformatik
Detaylı özgeçmiş
Saliha - CV (TR).pdf

E-BOOK

1. Computational Systems Biology of Pathogen-Host Interactions, Edited by: S. Durmuş, T. Çakır, R. Guthke, Lausanne: Frontiers Media, 2016.

ARTICLES

17. S. Durmuş, K.Ö. Ülgen, "Comparative Interactomics for Virus-Human Protein-Protein Interactions: DNA Viruses versus RNA Viruses", FEBS Open Bio, doi: 10.1002/2211-5463.12167, 2017.

16. R. Guthke, S. Gerber, T. Conrad, S. Vlaic, S. Durmuş, T. Çakır, F.E. Sevilgen, E. Shelest, J. Linde, “Data-based Reconstruction of Gene Regulatory Networks of Fungal Pathogens”, Frontiers in Microbiology, 7, 570, 2016.

15. E. Nourani, F. Khunjush, S. Durmuş, “Computational Prediction of Virus-Human Protein-Protein Interactions using Embedding Kernelized Heterogeneous Data”, Molecular BioSystems, 12, 1976-1986, 2016.

14. S. Durmuş, T. Çakır, R. Guthke, “Editorial: Computational Systems Biology of Pathogen-Host Interactions”, Frontiers in Microbiology, 7, 21, 2016.

13. S. Durmuş, T. Çakır, A. Özgür, R. Guthke, “A Review on Computational Systems Biology of Pathogen-Host Interactions”, Frontiers in Microbiology, 6, 235, 2015.

12. S. Durmuş, K.Ö. Ülgen, “Patojen-Konak Etkileşimlerinin Sistem Biyolojisi (Systems Biology of Pathogen-Host Interactions)”, Enfeksiyon Patogenezi ve Bağışıklık (Pathogenesis of Infection and Immunity). Edited by: S. Badur, H. Abacıoğlu, B. Öngen. İstanbul: Akademi Press, 110th chapter, 2015. (in Turkish)

11. E. Nourani, F. Khunjush, S. Durmuş, “Computational Approaches for Prediction of Pathogen-Host Protein-Protein Interactions”, Frontiers in Microbiology, 6, 94, 2015.

10. S. Durmuş, T. Çakır, E. Ardıç, A.S. Sayılırbaş, A. Uğurlu, G. Konuk, M. Konuk, H. Sarıyer, İ. Karadeniz, A. Özgür, F.E. Sevilgen, K.Ö. Ülgen, “PHISTO: Pathogen-Host Interaction Search Tool”, Bioinformatics, 29, 1357-1358, 2013.

9. S. Durmuş, K.Ö. Ülgen, “Systems Biology of Pathogen-Host Interaction: Networks of Protein-Protein Interaction within Pathogens and Pathogen-Human Interactions in the Post-Genomic Era”, Biotechnology Journal, 8, 85-96, 2013.

8. B. Nalbantoğlu, S. Durmuş, K.Ö. Ülgen, “Wnt Signaling Network in Homo Sapiens”, Cell Metabolism - Cell Homeostasis and Stress Response. Edited by: P. Bubulya. Rijeka: InTech, 8th chapter, 2012.

7. S. Durmuş, T. Çakır, K.Ö. Ülgen, “Infection Strategies of Bacterial and Viral Pathogens through Pathogen-Host Protein-Protein Interactions”, Frontiers in Microbiology, 3, 46, 2012.

6. A. Eren Toku, S. Durmuş, F.B. Kavun Özbayraktar, K.Ö. Ülgen, “Reconstruction and Crosstalk of Protein-Protein Interaction Networks of Wnt and Hedgehog Signaling in Drosophila Melanogaster”, Computational Biology and Chemistry, 35 (5), 282-292, 2011.

5. S.E. Acuner Özbabacan, S. Durmuş, K.Ö. Ülgen, “Crucial Components in Toll-like Receptor Signaling Network as Key Regulators for Immunological Disorders”, International Journal of Physical Sciences, 6 (8), 2016-2026, 2011.

4. S. Durmuş, P. Ümit, A. Eren, K.Ö. Ülgen “Reconstruction of Insulin Signaling Protein-Protein Interaction Network in Homo Sapiens”, Journal of Biomedicine and Biotechnology, 690925, 2010.

3. S. Durmuş, K.Y. Arga, K.Ö. Ülgen, “Drug Targets for Tumorigenesis: Insights from Structural Analysis of EGFR Signaling Network”, Journal of Biomedical Informatics, 42, 228-236, 2009.

2. E. Yücel, A. Cankorur, E. Dereli, F. Alazi, İ. Aslandağ, B. Kavun, S. Durmuş, K.Y. Arga, K.Ö. Ülgen, “Deciphering the Crosstalk between Sphingolipid Mechanism and Signaling Pathways in Baker’s Yeast”, Sigma Journal of Engineering and Natural Sciences, 26, 162-174, 2008.

1. S. Durmuş, T. Çakır, K.Ö. Ülgen, “Analysis of Enzymopathies in the Human Red Blood Cells by Constraint Based Stoichiometric Modeling Approaches”, Computational Biology and Chemistry, 30, 327-338, 2006.

  • Doktora: Boğaziçi University, Department of Chemical Engineering, 2013
  • Yüksek lisans: Boğaziçi University, Department of Chemical Engineering, 2007
  • Lisans: Boğaziçi University, Department of Chemical Engineering, 2004