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KİTAPLAR
2024 • Yay C, Kalyon KB, İşleten Hoşoğlu M. Tarımsal ve gıda işleme atık/yan ürünlerinden döngüsel biyoekonomi çerçevesinde protein hidrolizat/peptitlerin eldesi ve biyoaktif özelliklerine genel bir bakış. Karakaya S, editör. Gıda Endüstrisi ve Beslenmede Yeni Akımlar. 1. Baskı. Ankara: Türkiye Klinikleri; 2024. p.67-74.
2022 • Biodegradable Waste Management in the Circular Economy: Challenges and Opportunities: Chapter 1 Circular Bioeconomy and Sustainability Işıl Aksan Kurnaz, Elif Damla Arisan, M. Levent Kurnaz Book Editor(s): Malgorzata Kacprzak,Eleonore Attard,Kari-Anne Lyng,Helena Raclavska,BalRam Singh,Eyob Tesfamariam,Franck Vandenbulck. First published: 05 July 2022 https://doi.org/10.1002/9781119679523.ch1
• Hastalıkta ve Sağlıkta Hücre Ölümü - Mekanizmaları ve Deneysel Araştırma Modelleri” Elif Damla ARISAN, Bölüm 4.5. HÜCRE ÖLÜMÜNÜN CAENORHABDITIS ELEGANS MODEL ORGANİZMASINDA İNCELENMESİ ISBN numarası: 978-605-73554-1-6 Kitap editörleri: Prof. Dr. Semra Koçtürk, Prof. Dr. Seda Vatansever 2022
• Cakmak I., Brown P., Colmenero-Flores J.M., Husted S., Kutman B.Y., Nikolic M., Rengel Z, Schmidt S.B., and Zhao F.J. (2022) Chapter 7: Micronutrients. In: Rengel Z, Cakmak I, White P (Eds.) Marschner's Mineral Nutrition of Plants, 4th Ed. Academic Press. Paperback ISBN: 9780128197738, eBook ISBN: 9780323853521
• Kutman UB. (2022) Chapter 9: Nutrition and Quality. In: Rengel Z, Cakmak I, White P (Eds.) Marschner's Mineral Nutrition of Plants, 4th Ed. Academic Press. Paperback ISBN: 9780128197738, eBook ISBN: 9780323853521
• Aksan Kurnaz I, Arısan ED, Kurnaz ML (2022). “Chapter 1, Circular Bioeconomy and Sustainability”, in Biodegradable Waste Management in the Circular Economy: challenges and opportunities, ed. Kacprzak M, Attard E et al, Wiley Pub, ISBN 978-1-119-67984-4
• Kandemir B, Ertural B, Cicek BN, Sonmez E, Aksan Kurnaz I, Savasan Sogut M, Ari Uyar O (2022). Bölüm 14 “Sinirbilim”, Biyomedikal Mühendisliğine Giriş, Ed. İsmail Devecioğlu, Nobel Akademik Yayıncılık ISBN 978-625-417-499-5
• Aksan Kurnaz I (2022). Cilt 1 Bölüm 4 “Yapı”, Viroloji, Ed. Hikmet Geçkil, Palme Yayıncılık
• Aksan Kurnaz I (2022). Cilt 2 Bölüm 12 “İnsan Bağışıklık Yetmezliği Virüsü Tip 1 Patojenezi”, Viroloji, Ed. Hikmet Geçkil, Palme Yayıncılık
• Kurnaz I, Ertural B, Cicek BN (2022). Bölüm 1.2.5 Mitotik Katastrof, in Hastalıkta ve Sağlıkta Hücre Ölümü Mekanizmaları ve Deneysel Araştırma Modelleri, Yayınevi, İzmir; ISBN 978-605-73554-1-6
• Altun Z, Kurnaz I (2022). Editörler Bölüm II, in Hastalıkta ve Sağlıkta Hücre Ölümü Mekanizmaları ve Deneysel Araştırma Modelleri, Yayınevi, İzmir; ISBN 978-605-73554-1-6
• Kurnaz I, Sonmez E, Yigit EN (2022). Bölüm 2.2 Nörodejenerasyon, in Hastalıkta ve Sağlıkta Hücre Ölümü Mekanizmaları ve Deneysel Araştırma Modelleri, Yayınevi, İzmir; ISBN 978-605-73554-1-6
• Vatansever HS, Kurnaz I (2022). Editörler Bölüm II, in Hastalıkta ve Sağlıkta Hücre Ölümü Mekanizmaları ve Deneysel Araştırma Modelleri, Yayınevi, İzmir; ISBN 978-605-73554-1-6
• Babal YK, Sonmez E, Yigit EN, Beklen H, Gulfidan G, Arga KY, Kurnaz I (2022). Bölüm 3.7.Biyoinformatik ve Yeni Nesil Dizileme, in Hastalıkta ve Sağlıkta Hücre Ölümü Mekanizmaları ve Deneysel Araştırma Modelleri, Yayınevi, İzmir; ISBN 978-605-73554-1-6
• Sonmez E, Yigit EN, Kurnaz I (2022). Bölüm 4.8. In vitro Parkinson ve Huntington Hastalık Modelleri, in Hastalıkta ve Sağlıkta Hücre Ölümü Mekanizmaları ve Deneysel Araştırma Modelleri, Yayınevi, İzmir; ISBN 978-605-73554-1-6
2020 • Kutman B.Y. (2020). Bölüm 3: Tarımsal Biyoteknoloji, In: Aksan Kurnaz I, Salman Ünver S (Eds.) Biyoteknoloji Çağına Hoş Geldiniz!, ABA Publishing, Istanbul, Turkey. ISBN: 978-625-7718-05-9
• Aksan Kurnaz I, Salman Ünver S (2020). Biyoteknoloji Çağına Hoş Geldiniz! ABA Publishing, Istanbul, Turkey. ISBN: 978-625-7718-05-9
AKADEMİK MAKALELER
2024 • Taner Sar, Ariel Marchlewicz, Sharareh Harirchi, Fani Th Mantzouridou, Muge Isleten Hosoglu, Meltem Yesilcimen Akbas, Coralie Hellwig, Mohammad J. Taherzadeh. 2024. Resource recovery and treatment of wastewaters using filamentous fungi. Science of the Total Environment 951, 175752
• Cansu YAY, Zeynep Ozlem CINAR, Serhat DONMEZ, Tugba BOYUNEGMEZ TUMER, Onur GUNESER, Muge ISLETEN HOSOGLU. 2024. Optimizing bioreactor conditions for Spirulina fermentation by Lactobacillus helveticus and Kluyveromyces marxianus: Impact on chemical & bioactive properties. Bioresource Technology. Volume 403, 130832
• Dönmez, S., Lapinskaite, R., Atalay, H.N., Tokay, E., Kockar, F., Rycek, L., Özbil, M., Tumer, T.B. “Selagibenzophenone B and Its Derivatives: SelB-1, a Dual Topoisomerase I/II Inhibitor Identified through In Vitro and In Silico Analyses”, ACS Bio & Med Chem Au, 4(4), 178-189, 2024. https://pubs.acs.org/doi/10.1021/acsbiomedchemau.4c00027
• Atiq, F., Rawley, O., O'Sullivan, J.M., Özbil, M., Doherty, D., Cooke, N., Terraube, V., Chion, A., Amin, A., Hulshof, A., Baci, B., Byrne, C., Aburawi, H., Lillicrap, D., O'DOnnell, J.S. "R1205H (Vicenza) causes conformational changes in the VWF-D’D3 domains and enhances VWF binding to clearance receptors LRP1 and SR-A1", Journal of Thrombosis and Haemostasis, accepted. 2024. https://www.sciencedirect.com/science/article/pii/S1538783624003854?via%3Dihub
• Antika, G., Cinar,Z.Ö., Dönmez, S., Seçen, E., Özbil, M., Prandi, C., Tumer, T.B. “Effects of Strigolactones on NLRP3 Activation, Nitrosative Stress, and Antioxidant Mox Phenotype: In Vitro and In Silico Evidence” ACS Bio & Med Chem Au, 4(3), 131-136, 2024. pubs.acs.org/doi/10.1021/acsbiomedchemau.3c00063
• Soylu-Eter, Ö., Göktaş, F., Duran, G. N., Özbil, M., Karalı, N. L. "1H-Indole-2,3-dione 3-thiosemicarbazones carrying a 4-sulfamoylphenyl moiety with selective antiviral activity against Reovirus-1" Acta. Chimica. Slov. ,71(2), 215-225, 2024. https://acsi-journal.eu/index.php/ACSi/article/view/8589
• Çapan, Ö.Y., Yapıcı, Z., Özbil, M., Çağlayan, H.S. “Exome data of developmental and epileptic encephalopathy patients reveals de novo and inherited pathologic variants in epilepsy-associated genes” Seizure-Eur. J. Epilep., 116, 51-64, 2024. www.sciencedirect.com/science/article/pii/S1059131123001620
• Dokuz, S., Tasdurmazlı, S., Acar, T., Duran, G.N., Ozdemir, C., Ozbey, U., Ozbil, M., Karadayı, S., Bayrak, O.F., Derman, S., Chen, J.Y-S., Ozbek, T. "Evaluation of Bacteriophage ϕ11 host recognition protein and its host-binding peptides for diagnosing/targeting of Saphylococcus aureus infections", International Journal of Antimicrobial Agents, early view. 2024. www.sciencedirect.com/science/article/pii/S0924857924001481?via%3Dihub
• Busra Eren, Meliha Koldemir Gunduz, Gullu Kaymak, Derya Berikten, and Zehra Banu Bahsi Therapeutic Potential of Sol–Gel ZnO Nanocrystals: Anticancer, Antioxidant, and Antimicrobial Tri-Action ACS Omega 2024 9 (13), 14818-14829 DOI: 10.1021/acsomega.3c07191
2023 • Habibe Kurt, Muge Isleten Hosoglu, Onur Guneser, Yonca Karagul-Yuceer. 2023. Influence of Different Bacteria Species in Chemical Composition and Sensory Properties of Fermented Spirulina. Food Chemistry. Vol. 400. 133994. https://doi.org/10.1016/j.foodchem.2022.133994
• Linhares Y, Kaganski A, Agyare C, Kurnaz IA, Neergheen V, Kolodziejczyk B, Kedra M, Wahajuddin M, El-Youssef L, dela Cruz TE, Baran Y, Pesic M, Shrestha U, Bakiu R, Allard PM, Rybtsov S, Pieri M, Siciliano V, Bueso YF (2023). Biodiversity: the overlooked source of human health. Trends Molec Med 1860; doi: 10.1016/j.molmed.2022.12.002
• Yigit EN, Sonmez E, Cakir ZB, Aksan Kurnaz I, Cakir T (2023) Transcriptome study identifies quercetin and rutin as repurposed drugs for Parkinson Disease in in vitro 6-OHDA model. Molec Omics doi: 10.1039/D2MO00267A
• Z. B. Bahsi &. D. Berikten, “Characterization and Antimicrobial Activity of Sustainable Aspergillus niger-mediated ZnO Nanoparticles”, Fulltext paper, 5th INTERNATIONAL "ARTEMİS" CONGRESS ON LIFE, ENGINEERING, AND APPLIED SCIENCES, 11 October 2023, 130 - 136.
• Soylu-Eter, Ö., Duran, G.N., Özbil, M., Göktaş, F., Cihan-Üstündağ, G., Karalı, N. “Antiviral activity and molecular modeling studies on 1H-indole-2,3-diones carrying a naphthalene moiety” J. Mol. Struc., 1281, 135100, 2023. www.sciencedirect.com/science/article/abs/pii/S0022286023002016?via%3Dihub
2022 • Mortoglou M, Miralles F, Arisan ED, Dart A, Jurcevic S, Lange S, Uysal- Onganer P. microRNA-21 Regulates Stemness in Pancreatic Ductal Adenocarcinoma Cells. Int J Mol Sci. 2022 Jan 24;23(3):1275. doi: 10.3390/ijms23031275. PMID: 35163198; PMCID: PMC8835847.
• Ayhan-Sahin B, Apaydın ZE, Obakan-Yerlikaya P, Arisan ED, Coker-Gurkan A. Synthesis and characterization of novel ssDNA X-aptamers targeting Growth Hormone Releasing Hormone (GHRH). PLoS One. 2022 Jan 21;17(1):e0260144. doi: 10.1371/journal.pone.0260144. PMID: 35061691; PMCID: PMC8782341.
• Kilbas PO, Can ND, Kizilboga T, Ezberci F, Doganay HL, Arisan ED, Dinler Doganay G. CRISPR/Cas9-mediated Bag-1 knockout increased mesenchymal characteristics of MCF-7 cells via Akt hyperactivation-mediated actin cytoskeleton remodelling. PLoS One. 2022 Jan 7;17(1):e0261062. doi:10.1371/journal.pone.0261062. PMID: 34995286; PMCID: PMC8741009.
• Serdar Arisan, Pelin Ozfiliz-Kilbas, Ozge Rencuzogullari, Narcin Palavan Unsal, Ajda Coker-Gurkan, Pinar Obakan-Yerlikaya, Pinar Uysal-Onganer, Elif Damla Arisan, Circulating microRNA expression profiles to identify a potential link between prostate cancer and obesity, Human Gene, Volume 34, 2022, 201109, doi.org/10.1016/j.humgen.2022.201109.
• Ozge Rencuzogullari, Elif Damla Arisan. Palbociclib suppresses the cancer stem cell properties and cell proliferation through increased levels of miR-506 or miR-150 in Panc-1 and MiaPaCa-2 cells. Turkish J of Biology, doi:10.55730/biy-2203-62, 2022.
• Arisan, E. D., Dart, D. A., Grant, G. H., Dalby, A., Kancagi, D. D., Turan, R. D., Yurtsever, B., Karakus, G. S., Ovali, E., Lange, S., & Uysal-Onganer, P. (2022). microRNA 1307 Is a Potential Target for SARS-CoV-2 Infection: An in Vitro Model. ACS omega, 7(42), 38003–38014. https://doi.org/10.1021/acsomega.2c05245
• Pinar Obakan Yerlikaya, Leila Mehdizadehtapeh, Ozge Rencuzogullari, Fadina Kuryayeva, Sena Sedef Cevikli, Sevval Ozagar, Sibel Pinar Odabas, Sude Tunckol, Hakan Yetim, Ajda Coker Gurkan, Elif Damla Arisan. Gemcitabine in combination with epibrassinolide enhanced the apoptotic response in an ER stress-dependent manner and reduced the epithelial-mesenchymal transition in pancreatic cancer cells. Turkish J of Biology, 2022. Accepted for publication
• Obakan Yerlikaya, P., Adacan, K., Karatug Kacar, A., Coker Gurkan, A., & Arisan, E. D. (2022). Epibrassinolide impaired colon tumor progression and induced autophagy in SCID mouse xenograft model via acting on cell cycle progression without affecting endoplasmic reticulum stress observed in vitro. The international journal of biochemistry cell biology, 155, 106360. Advance online publication. https://doi.org/10.1016/j.biocel.2022.106360
• Elif Ilhan, Sumeyye Cesur, Rabia Betul Sulutas, Esra Pilavci, Basak Dalbayrak, Elif Kaya, Elif Damla Arisan, Gulgun Bosgelmez Tinaz, Mustafa Sengor, Ewa Kijeńska-Gawrońska, Faik Nuzhet Oktar, Oguzhan Gunduz, The Role of Multilayer Electrospun Poly(Vinyl Alcohol)/Gelatin nanofibers loaded with Fluconazole and Cinnamaldehyde in the Potential Treatment of Fungal Keratitis, European Polymer Journal, Volume 176, 2022
• Yurduseven K, Babal YK, Celik E, Kerman BE, Kurnaz IA. Multiple Sclerosis Biomarker Candidates Revealed by Cell-Type-Specific Interactome Analysis. OMICS. 2022 May;26(5):305-317. doi: 10.1089/omi.2022.0023. Epub 2022 Apr 27. PMID: 35483054.
• Coker-Gurkan A, Koyuncu K, Yerlikaya PO, Arisan ED. miR27a, a fine-tuning molecule, interacts with growth hormone (GH) signaling and ornithine decarboxylase (ODC) via targeting STAT5. Amino Acids. 2022 Jan;54(1):71-84. doi: 10.1007/s00726-021-03101-9. Epub 2021 Nov 26. PMID: 34825975.
• Onur Guneser, Yonca Karagul-Yuceer, Muge Isleten Hosoglu, Sine Ozmen Togay, Murat Elibol. 2022. Production of flavour compounds from rice bran by yeasy metabolisms of Kluyveromyces marxianus and Debaryomyces hansenii. Braz J Microbiol. doi: 10.1007/s42770-022-00766-6
• Busra Sahin, Muge Isleten Hosoglu, Onur Guneser, Yonca Karagul-Yuceer. 2022. Fermented Spirulina products with Saccharomyces and non- Saccharomyces yeasts: Special reference to their microbial, physico-chemical and sensory characterizations. Food Bioscience. Volume 47, 101691
• Antika, G., Cinar, Z.Ö., Seçen, E., Özbil, M., Tokay, E., Köçkar, F., Prandi, C., Tumer, T.B. “Strigolactone Analogs: Two New Potential Bioactiphores For Gliblastoma” ACS Chem. Neurosci., 13, 5, 572–580, 2022.
• Çubuk, H., Özbil, M., “In silico analysis of SARS-CoV-2 spike protein N501Y and N501T mutation effects on human ACE2 binding” J. Molecular Graphics and Modelling, 116, 108260, 2022.
2021 • Mutlu-Durak H. and Yildiz-Kutman B. (2021) Seed Treatment with Biostimulants Extracted from Weeping Willow (Salix babylonica) Enhances Early Maize Growth. Plants 10, 1449.
• Nesrin Merve Çelebi Uzkuç, Hasan Uzkuç, Mehmet Mert Berber, Kübra Tarhan Kuzu, Sine Ozmen Togay, Müge Isleten Hosoglu, Aysegül Kırca Toklucu, Saliha B. Kurt, Nurettin Sahiner, Yonca Karagül Yüceer. 2021. Stabilisation of lavender essential oil extracted by microwave-assisted hydrodistillation: Characteristics of starch and soy protein-based microemulsions. Industrial Crops & Products 172 (2021) 114034
• Kılmanoglu Hilal, Isleten-Hosoglu, M., Karagul Yuceer, Y. Guneser, O., 2021. Optimization of pretreatment and enzymatic hydrolysis conditions of tomato pomace for production of alcohols and esters by Kluyveromyces marxianus, LWT, 138
• Başak Dalbayrak, Ekin Sönmez , Habibe Kurt , Müge İşleten Hoşoğlu , İsrafil Küçük , Hale Saybaşılı, Işıl Kurnaz. 2021. Characterization of a 3D Neuronal-Culture Using Alginate Hydrogels and Optimize For Neuronal Survival and Axon Growth. Natural & Applied Sciences Journal, Vol.3, 8, 71-80.
• Sogut MS, Venugopal C, Kandemir B, Dag U, Mahendram S, Singh S, Gulfidan G, Arga KY, Yilmaz B, Kurnaz IA. ETS-Domain Transcription Factor Elk-1 Regulates Stemness Genes in Brain Tumors and CD133+ BrainTumor-Initiating Cells. Journal of Personalized Medicine. 2021; 11(2):125. https://doi.org/10.3390/jpm11020125
• Babal YK, Kandemir B, Kurnaz IA. Gene Regulatory Network of ETS Domain Transcription Factors in Different Stages of Glioma. Journal of Personalized Medicine. 2021; 11(2):138. https://doi.org/10.3390/jpm11020138
• Arisan ED, Rencuzogullari O, Cieza-Borrella C, Miralles Arenas F, Dwek M, Lange S, Uysal-Onganer P. MiR-21 Is Required for the Epithelial-Mesenchymal Transition in MDA-MB-231 Breast Cancer Cells. Int J Mol Sci. 2021 Feb 4;22(4):1557. doi: 10.3390/ijms22041557. PMID: 33557112.
• Rencuzogulları O, Yerlikaya PO, Gürkan AÇ, Arısan ED, Telci D. Palbociclib negatively regulates fatty acid synthesis due to upregulation of AMPKα and miR-33a levels to increase apoptosis in Panc-1 and MiaPaCa-2 cells. Biotechnol Appl Biochem. 2021 Feb 3. doi: 10.1002/bab.2113. Epub ahead of print. PMID:
• Lange S, Arisan ED, Grant GH, Uysal-Onganer P. MicroRNAs for Virus Pathogenicity and Host Responses, Identified in SARS-CoV-2 Genomes, May Play Roles in Viral-Host Co-Evolution in Putative Zoonotic Host Species. Viruses. 2021 Jan 16;13(1):117. doi: 10.3390/v13010117. PMID: 33467206; PMCID: PMC7830670.
• Bortecine Sevgin, Mervenur Coban, Özge Rencuzogullari, Ajda Coker Gurkan, Pinar Obakan Yerlikaya, Pinar Uysal Onganer, Elif Damla ARISAN. AMPK is the key target for the CDK4/6 inhibitors mediated therapeutic responses in PANC-1 and MIA PaCa-2 pancreatic cancer cell lines. https://www.mdpi.com/2673-7140/1/1/5
• Mortoglou M, Wallace D, Buha Djordjevic A, Djordjevic V, Arisan ED, Uysal-Onganer P. MicroRNA-Regulated Signaling Pathways: Potential Biomarkers for Pancreatic Ductal Adenocarcinoma. Stresses. 2021; 1(1):30-47. https://doi.org/10.3390/stresses1010004
• Duran, G.N., Özbil, M. “Structural rearrangement of Neisseria meningitidis transferrin binding protein A (TbpA) prior to human transferrin protein (hTf) binding” Turk. J. Chem, 45, 1146-1154, 2021.
• Çubuk, H., Özbil, M. “Comparison of Clinically Approved Molecules on SARS-CoV-2 Drug Target Proteins: A Molecular Docking Study” Turk. J. Chem, 45, 35-41, 2021. doi:10.3906/kim-2008-35 journals.tubitak.gov.tr/chem/issues/kim-21-45-1/kim-45-1-5-2008-35.pdf
• Cubuk, H., Ozbil, M., Hatir, P.C. “Computational analysis of functional monomers used in molecular imprinting for promising COVID-19 detection” Comput. Theor. Chem., 11325, 2021. https://doi.org/10.1016/j.comptc.2021.113215. www.sciencedirect.com/science/article/pii/S2210271X21000748
• Fareed, F.M.A, Korulu, S., Özbil, M., Çapan, Ö.Y. “HNF1A-MODY Mutations in Nuclear Localization Signal Impair HNF1A-Import Receptor KPNA6 Interactions” Protein J., 2021. doi:10.1007/s10930-020-09959-0 link.springer.com/article/10.1007/s10930-020-09959-0
• Z. B. Bahsi O., GAMZE SEKİCEK, “Ca doped ZnO thin films by sol-gel dip coating method”, AIP Conference Proceedings, 2021, 1551-7616, 2380, 040009, 1-6. https://doi.org/10.1063/5.0058237
• Z. B. Bahsi. O., ONUR ALP AKSAN, “Characterization of TiO2: ZnO thin films by sol-gel dip coating method”, AIP Conference Proceedings, 2021, 1551-7616, 2380, 040001, 1-6. https://doi.org/10.1063/5.0058239
• Turk‐Erbul, B., Karaman E.F., Duran, G.N., Ozbil, M., Ozden, S., Goktas, F. “Synthesis, in vitro cytotoxic and apoptotic effects, and molecular docking study of novel adamantane derivatives” Arch Pharm. e2000256, 2021. https://onlinelibrary.wiley.com/doi/full/10.1002/ardp.202000256
2020 • Osipitan, O., Yildiz-Kutman, B., Watkins, S., Brown, P., & Hanson, B. (2020). Impacts of repeated glyphosate use on growth of orchard crops. Weed Technology, 34(6), 888-896. doi:10.1017/wet.2020.85
• Sevinçli, Z.Ş., Duran, G.N., Özbil, M., Karalı, N. “Synthesis, molecular modeling and antiviral activity of novel 5-fluoro-1H-indole-2,3-dione 3-thiosemicarbazones ” Bioorg. Chem., 2068, 31499, 2020. https://onlinelibrary.wiley.com/doi/full/10.1002/ardp.201900028
• Muge Isleten Hosoglu, Yonca Karagul-Yuceer, Onur Guneser. Aroma characterization of heterotrophic microalgae Crypthecodinium cohnii using solid-phase microextraction and gas chromatography–mass spectrometry/olfactometry during different growth phases. Algal research, Vol. 49. 2020.
• Katarzyna SWIĄDER, Karina BIALEK, Muge ISLETEN HOSOGLU. Varieties of date palm fruits (phoenixdactylifera l.), their characteristics and cultivation. Technological Progress In Food Processing, 173-179. 2020.
• Arisan ED, Dart A, Grant GH, et al. The Prediction of miRNAs in SARS-CoV-2 Genomes: hsa-miR Databases Identify 7 Key miRs Linked to Host Responses and Virus Pathogenicity-Related KEGG Pathways Significant for Comorbidities. Viruses. 2020;12(6):E614. Published 2020 Jun 4. doi:10.3390/v12060614.https://www.mdpi.com/1999-4915/12/6/614
• Adacan K, Obakan-Yerlikaya P, Arisan ED, Coker-Gurkan A, Kaya RI, Palavan-Unsal N. Epibrassinolide-induced autophagy occurs in an Atg5-independent manner due to endoplasmic stress induction in MEF cells [published online ahead of print, 2020 May 24]. Amino Acids. 2020;10.1007/s00726-020-02857-w. doi:10.1007/s00726-020-02857-w. https://link.springer.com/article/10.1007/s00726-020-02857-w
• Arısan ED, Rencuzogullari O, Coban M, Sevgin B, Pinar Obakan Yerlikaya, Ajda Çoker Gürkan, and Narçin Palavan Unsal The role of the PI3K/AKT/mTOR signaling axis in the decision of the celastrol-induced cell death mechanism related to the lipid regulatory pathway in prostate cancer cells, Phytotherapy letters
• Elif Damla Arisan, Ozge Rencuzogullari; Buse Keskin; Guy H. Grant; Pinar Uysal-Onganer. Wnt-11 expression regulates epithelial-mesenchymal transition and neuroendocrine-like differentiation via JNK pathway in prostate cancer. Biology (ISSN 2079-7737). https://www.mdpi.com/2079-7737/9/7/142
• Elif Damla Arisan, Pinar Uysal Onganer, Sigrun Lange. Putative roles for Peptidylarginine Deiminases in COVID-19. International Journal of Molecular Sciences. Peptidylarginine Deiminases and Protein Deimination in Health and Disease Special Issue. 28 June 2020. https://www.mdpi.com/1422-0067/21/13/4662
• Arisan, E.D., Freitas, I.L., Pazoki, K., Rahim, S. and Uysal Onganer, P. 2020. The Role of Differentially Expressed miRNAs and Potential miRNA-mRNA Regulatory Network in Prostate Cancer Progression and Metastasis. Biomedical Journal of Technical and Scientific Research. 25 (4), pp. 19382 19387. doi:10.26717/BJSTR.2020.25.004241. https://biomedres.us/fulltexts/BJSTR.MS.ID.004241.php
• Arisan, E.D., Rencuzogullari, O., Freitas, I.L., Radzali, S., Keskin, B., Kothari, A., Warford, A. and Uysal Onganer, P. 2020. Upregulated Wnt-11 and miR-21 Expression Trigger Epithelial Mesenchymal Transition in Aggressive Prostate Cancer Cells . Biology. 9, p. 52. doi:10.3390/biology9030052. https://www.mdpi.com/2079-7737/9/3/52
2019 • Zehra Banu Bahsi Oral (2019). Self -Assembled Monolayers with Peptide Nucleic Acid (PNA) Probe to Develop Electrochemical Biosensors. Düzce University Journal of Science Technology, 7(3), 1806-1812., Doi: https://doi.org/10.29130/dubited.558155 (Kontrol No: 5822132)
2016 • Kandemir B, Dag U, Gungor BB, Durasi IM, Erdogan B, Kayacan Y, Sahin E, Sezerman U, Aksan Kurnaz I (2016). Identification of novel transcriptional targets of Pea3 in SH-SY5Y neuroblastoma cells. PLoS One 12(2):e0170585.http://dx.doi.org/10.1371/journal.pone.0170585
• Zehra Banu Bahsi Oral (2016). “Application of Mixed Self-Assembled Monolayers (Mixed SAMs) for Nucleic Acid Detection”, Measurement, 94, 1-4., Doi: 10.1016/j.measurement.2016.07.060.
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